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ONTOLOGY REPORT - ANNOTATIONS

Term:synapse assembly
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Accession:GO:0007416 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form a synapse. This process ends when the synapse is mature (functional).
Synonyms:exact_synonym: synapse biogenesis;   synaptogenesis
 xref: Wikipedia:Synaptogenesis

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show annotations for term's descendants           Sort by:
synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase (Cartwright blood group) ISO RGD PMID:12799140 RGD:1299197 NCBI chrNW_004624740:16,275,108...16,280,639
Ensembl chrNW_004624740:16,275,117...16,281,793 		JBrowse link
G Add2 adducin 2 involved_in ISO (PMID:21435558) SynGO PMID:21435558 NCBI chrNW_004624762:2,619,371...2,726,586
Ensembl chrNW_004624762:2,674,620...2,726,587 		JBrowse link
G Adgrf1 adhesion G protein-coupled receptor F1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27759003) TreeGrafter
MGI		 PMID:27759003 GO_REF:0000118 NCBI chrNW_004624754:13,722,528...13,749,892
Ensembl chrNW_004624754:13,722,457...13,751,378 		JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in ISO (PMID:30792275)
(MGI:5688833|PMID:22405201), (PMID:30792275)		 SynGO PMID:22405201 PMID:30792275 MGI:5688833 NCBI chrNW_004624761:7,219,269...8,101,988
Ensembl chrNW_004624761:7,242,948...7,804,418 		JBrowse link
G Agrn agrin ISO RGD PMID:12486121 RGD:1578367 NCBI chrNW_004624818:8,475,453...8,508,818
Ensembl chrNW_004624818:8,476,562...8,508,786 		JBrowse link
G Akap5 A-kinase anchoring protein 5 involved_in ISO (PMID:22623657) UniProt PMID:22623657 NCBI chrNW_004624734:36,550,020...36,555,142
Ensembl chrNW_004624734:36,550,447...36,551,742 		JBrowse link
G Asic2 acid sensing ion channel subunit 2 acts_upstream_of ISO (PMID:19571134) MGI PMID:19571134 NCBI chrNW_004624875:969,857...2,049,531
Ensembl chrNW_004624875:969,626...2,049,061 		JBrowse link
G Bdnf brain derived neurotrophic factor involved_in ISO (PMID:19036963) BHF-UCL PMID:19036963 NCBI chrNW_004624766:17,281,882...17,330,601
Ensembl chrNW_004624766:17,279,630...17,330,490 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:10336181)
(PMID:14973254)		 MGI PMID:10336181 PMID:14973254 NCBI chrNW_004624901:707,322...932,658
Ensembl chrNW_004624901:708,234...932,643 		JBrowse link
G Cadm1 cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:21145003)
(PMID:12202822)		 SynGO
MGI		 PMID:12202822 PMID:21145003 NCBI chrNW_004624784:10,595,876...10,933,024
Ensembl chrNW_004624784:10,591,824...10,932,981 		JBrowse link
G Caprin1 cell cycle associated protein 1 acts_upstream_of_or_within ISO (PMID:20861386) MGI PMID:20861386 NCBI chrNW_004624767:13,010,512...13,049,507
Ensembl chrNW_004624767:13,012,149...13,048,808 		JBrowse link
G Cbln1 cerebellin 1 precursor involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21356198) Ensembl
MGI		 PMID:21356198 GO_REF:0000107 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105 		JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of ISO (PMID:21356198) MGI PMID:21356198 NCBI chrNW_004624806:8,371,966...8,381,908
Ensembl chrNW_004624806:8,371,995...8,380,059 		JBrowse link
G Cdh1 cadherin 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:12123610 GO_REF:0000118 RGD:632466 NCBI chrNW_004624746:17,480,472...17,557,722
Ensembl chrNW_004624746:17,483,469...17,557,581 		JBrowse link
G Cdh2 cadherin 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:12125071 GO_REF:0000118 RGD:632477 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470 		JBrowse link
G Cdh9 cadherin 9 involved_in ISO PMID:21867881
(PMID:21867881)		 SynGO-UCL
SynGO		 PMID:21867881 RGD:13432233 NCBI chrNW_004624759:26,826,388...26,963,243
Ensembl chrNW_004624759:26,868,228...26,962,775 		JBrowse link
G Cdk5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18054859) Ensembl
MGI		 PMID:18054859 GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937 		JBrowse link
G Clstn3 calsyntenin 3 acts_upstream_of_or_within ISO (PMID:24094106) MGI PMID:24094106 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221 		JBrowse link
G Dbnl drebrin like involved_in ISO (MGI:5486540|PMID:18829961) UniProt PMID:18829961 MGI:5486540 NCBI chrNW_004624740:7,950,552...7,960,592
Ensembl chrNW_004624740:7,950,556...7,960,568 		JBrowse link
G Dnm3 dynamin 3 involved_in ISO PMID:15741233 UniProt PMID:15741233 RGD:8554738 NCBI chrNW_004624771:9,247,463...9,838,276
Ensembl chrNW_004624771:9,247,218...9,838,254 		JBrowse link
G Drd1 dopamine receptor D1 involved_in ISO PMID:10051231 BHF-UCL PMID:10051231 RGD:8554073 NCBI chrNW_004624733:14,517,540...14,522,173
Ensembl chrNW_004624733:14,518,146...14,520,905 		JBrowse link
G Drd2 dopamine receptor D2 involved_in ISO PMID:10051231 BHF-UCL PMID:10051231 RGD:8554073 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624765:3,612,781...4,742,219
Ensembl chrNW_004624765:3,613,379...4,734,585 		JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in ISO PMID:23209303 UniProt PMID:23209303 RGD:8554251 NCBI chrNW_004624793:12,595,521...12,870,803
Ensembl chrNW_004624793:12,592,574...12,796,155 		JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in ISO (MGI:5688833|PMID:22405201) UniProt PMID:22405201 MGI:5688833 NCBI chrNW_004624741:15,343,304...15,355,742
Ensembl chrNW_004624741:15,343,653...15,355,727 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16491079) Ensembl
MGI		 PMID:16491079 GO_REF:0000107 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473 		JBrowse link
G Gja10 gap junction protein alpha 10 acts_upstream_of_or_within ISO (PMID:16820008) MGI PMID:16820008 NCBI chrNW_004624799:4,278,097...4,279,588 JBrowse link
G Glra2 glycine receptor alpha 2 ISO RGD PMID:1645300 RGD:728718 NCBI chrNW_004624944:512,482...704,805
Ensembl chrNW_004624944:512,441...704,786 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO (PMID:19270340) MGI PMID:19270340 NCBI chrNW_004624775:18,410,514...18,443,169
Ensembl chrNW_004624775:18,410,755...18,439,246 		JBrowse link
G Gphn gephyrin ISO RGD PMID:9130666 RGD:1599855 NCBI chrNW_004624734:33,871,664...34,483,770
Ensembl chrNW_004624734:33,870,997...34,483,508 		JBrowse link
G Gpm6a glycoprotein M6A involved_in ISO PMID:19737934 UniProt PMID:19737934 RGD:8554345 NCBI chrNW_004624769:6,763,158...7,082,764
Ensembl chrNW_004624769:6,762,743...6,904,757 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 involved_in ISO (PMID:22623657) UniProt PMID:22623657 NCBI chrNW_004624733:35,337,039...35,648,184
Ensembl chrNW_004624733:35,339,683...35,647,349 		JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624812:561,290...1,158,012
Ensembl chrNW_004624812:562,308...1,154,934 		JBrowse link
G Map1b microtubule associated protein 1B ISO RGD PMID:17151949 RGD:2304009 NCBI chrNW_004624905:1,198,157...1,304,128
Ensembl chrNW_004624905:1,198,205...1,304,309 		JBrowse link
G Mapt microtubule associated protein tau involved_in ISO (PMID:26704708) ARUK-UCL PMID:26704708 NCBI chrNW_004624849:2,320,887...2,421,099 JBrowse link
G Mecp2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:17920015)
(PMID:18295506)		 MGI PMID:17920015 PMID:18295506 NCBI chrNW_004624946:620,581...685,339
Ensembl chrNW_004624946:628,284...685,246 		JBrowse link
G Myo6 myosin VI acts_upstream_of_or_within ISO (PMID:15657400) MGI PMID:15657400 NCBI chrNW_004624819:2,835,783...2,999,819
Ensembl chrNW_004624819:2,896,374...2,999,819 		JBrowse link
G Nlgn1 neuroligin 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21356198) UniProt
MGI		 PMID:21356198 GO_REF:0000117 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Nlgn3 neuroligin 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172 		JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:10707974) MGI PMID:10707974 NCBI chrNW_004624780:11,297,306...11,525,236
Ensembl chrNW_004624780:11,301,182...12,424,066 		JBrowse link
G Nrg3 neuregulin 3 involved_in ISO (PMID:30049711) SynGO PMID:30049711 NCBI chrNW_004624841:4,213,089...5,285,255
Ensembl chrNW_004624841:4,219,084...5,285,240 		JBrowse link
G Nrxn1 neurexin 1 acts_upstream_of
acts_upstream_of_or_within
involved_in		 ISO (PMID:21356198)
(PMID:12827191)
(PMID:31995730)		 MGI
SynGO		 PMID:12827191 PMID:21356198 PMID:31995730 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Nrxn2 neurexin 2 acts_upstream_of_or_within ISO (PMID:12827191) MGI PMID:12827191 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304 		JBrowse link
G Nrxn3 neurexin 3 acts_upstream_of_or_within ISO (PMID:12827191) MGI PMID:12827191 NCBI chrNW_004624734:22,161,837...23,757,367
Ensembl chrNW_004624734:22,163,166...23,692,660 		JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO (PMID:25224828) MGI PMID:25224828 NCBI chrNW_004624752:9,072,471...9,088,289
Ensembl chrNW_004624752:9,072,512...9,088,593 		JBrowse link
G Plxnd1 plexin D1 involved_in ISO (MGI:5311980|PMID:22179111) UniProt PMID:22179111 MGI:5311980 NCBI chrNW_004624872:542,776...571,019
Ensembl chrNW_004624872:543,553...571,019 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) BHF-UCL PMID:16675393 MGI:3629385 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO (PMID:26021297) ParkinsonsUK-UCL PMID:26021297 NCBI chrNW_004624807:5,478,570...5,483,473
Ensembl chrNW_004624807:5,478,707...5,483,475 		JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in ISO (MGI:5693671|PMID:26287463) UniProt PMID:26287463 MGI:5693671 NCBI chrNW_004624801:3,412,950...3,667,030
Ensembl chrNW_004624801:3,416,835...3,666,635 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in ISO (MGI:5432970|PMID:22699620) BHF-UCL PMID:22699620 MGI:5432970 NCBI chrNW_004624767:16,296,053...16,828,714
Ensembl chrNW_004624767:16,380,751...16,823,577 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (MGI:4948759|PMID:21423165) BHF-UCL PMID:21423165 MGI:4948759 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325 		JBrowse link
G Slc25a46 solute carrier family 25 member 46 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28376086) Ensembl
MGI		 PMID:28376086 GO_REF:0000107 NCBI chrNW_004624743:28,584,209...28,613,397 JBrowse link
G Slitrk1 SLIT and NTRK like family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624751:16,635,950...16,638,771
Ensembl chrNW_004624751:16,636,183...16,638,273 		JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:23543054) MGI PMID:23543054 NCBI chrNW_004624779:7,030,017...7,036,581
Ensembl chrNW_004624779:7,030,395...7,036,108 		JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 acts_upstream_of_or_within ISO (PMID:20231455) MGI PMID:20231455 NCBI chrNW_004624767:19,694,471...19,734,653
Ensembl chrNW_004624767:19,694,241...19,734,650 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO PMID:33363141 SynGO PMID:33363141 RGD:405650332 NCBI chrNW_004624767:10,729,766...10,803,253
Ensembl chrNW_004624767:10,729,413...10,748,455 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of ISO (PMID:9405095) MGI PMID:9405095 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303 		JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624769:22,078,361...22,151,679
Ensembl chrNW_004624769:22,080,073...22,151,626 		JBrowse link
excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISO (MGI:5516394|PMID:24094106) UniProt PMID:24094106 MGI:5516394 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:23074245)
(PMID:31141683)		 MGI PMID:23074245 PMID:31141683 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (PMID:27418511) UniProt PMID:27418511 NCBI chrNW_004624757:19,967,428...21,497,009
Ensembl chrNW_004624757:19,967,840...21,498,318 		JBrowse link
G Lrrc4 leucine rich repeat containing 4 acts_upstream_of_or_within ISO (PMID:16980967) MGI PMID:16980967 NCBI chrNW_004624783:7,934,627...7,937,723
Ensembl chrNW_004624783:7,934,791...8,122,933 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5908777|PMID:26440732)
(MGI:5780536|PMID:22960622)		 ARUK-UCL
ParkinsonsUK-UCL		 PMID:22960622 PMID:26440732 MGI:5780536 MGI:5908777 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Nptn neuroplastin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24554721) Ensembl
MGI		 PMID:24554721 GO_REF:0000107 NCBI chrNW_004624781:752,048...818,250
Ensembl chrNW_004624781:751,912...819,847 		JBrowse link
G Plxnb2 plexin B2 involved_in ISO (MGI:6269924|PMID:29981480) UniProt PMID:29981480 MGI:6269924 NCBI chrNW_004624752:473,451...498,555
Ensembl chrNW_004624752:469,973...498,729 		JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO (PMID:27373832)
(MGI:5829526|PMID:27373832)		 UniProt PMID:27373832 MGI:5829526 NCBI chrNW_004624807:4,937,573...5,169,104
Ensembl chrNW_004624807:4,935,472...5,169,050 		JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:5284797|PMID:15620359)
(PMID:29107521)		 BHF-UCL
MGI		 PMID:15620359 PMID:29107521 MGI:5284797 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304 		JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 acts_upstream_of_or_within ISO (PMID:29107521) MGI PMID:29107521 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531 		JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:6,273,989...6,276,788
Ensembl chrNW_004624760:6,273,994...6,276,776 		JBrowse link
inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln4 cerebellin 4 precursor involved_in ISO (MGI:6280523|PMID:30679375), (MGI:6383349|PMID:25534236) UniProt PMID:25534236 PMID:30679375 MGI:6280523 MGI:6383349 NCBI chrNW_004624790:540,084...555,128
Ensembl chrNW_004624790:538,490...546,586 		JBrowse link
G Clstn2 calsyntenin 2 involved_in ISO (MGI:6093273|PMID:26171716) UniProt PMID:26171716 MGI:6093273 NCBI chrNW_004624730:16,568,556...17,187,365
Ensembl chrNW_004624730:16,568,556...17,176,251 		JBrowse link
G Clstn3 calsyntenin 3 involved_in ISO (MGI:5516394|PMID:24094106) UniProt PMID:24094106 MGI:5516394 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:23074245)
(PMID:31141683)		 MGI PMID:23074245 PMID:31141683 NCBI chrNW_004624800:7,182,588...9,280,407
Ensembl chrNW_004624800:7,181,020...9,279,678 		JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624808:7,577,422...8,091,216
Ensembl chrNW_004624808:7,578,286...8,091,811 		JBrowse link
G Gabra1 gamma-aminobutyric acid type A receptor subunit alpha1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:27,708,364...27,763,824
Ensembl chrNW_004624733:27,708,271...27,763,523 		JBrowse link
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha2 involved_in ISO (MGI:6208009|PMID:27129275) UniProt PMID:27129275 MGI:6208009 NCBI chrNW_004624761:20,688,819...20,819,487
Ensembl chrNW_004624761:20,688,838...20,819,568 		JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:28,022,632...28,236,211
Ensembl chrNW_004624733:28,022,635...28,230,865 		JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 involved_in ISO (PMID:25489750)
(MGI:6208009|PMID:27129275)		 UniProt PMID:25489750 PMID:27129275 MGI:6208009 NCBI chrNW_004624896:962,253...1,173,842
Ensembl chrNW_004624896:966,487...1,173,625 		JBrowse link
G Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:27,506,827...27,593,750
Ensembl chrNW_004624733:27,504,660...27,594,039 		JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in ISO (MGI:6272145|PMID:30125937) UniProt PMID:30125937 MGI:6272145 NCBI chrNW_004624908:2,128,764...2,136,385
Ensembl chrNW_004624908:2,131,033...2,134,835 		JBrowse link
G Lgi2 leucine rich repeat LGI family member 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:7,317,471...7,344,003
Ensembl chrNW_004624755:7,317,445...7,348,236 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (PMID:23358245) MGI PMID:23358245 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206 		JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (MGI:5780536|PMID:22960622) ParkinsonsUK-UCL PMID:22960622 MGI:5780536 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Npas4 neuronal PAS domain protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:19,953,746...19,959,472
Ensembl chrNW_004624767:19,954,323...19,959,360 		JBrowse link
G Plxnb1 plexin B1 involved_in ISO (MGI:5498626|PMID:23699507), (MGI:6269924|PMID:29981480) UniProt PMID:23699507 PMID:29981480 MGI:5498626 MGI:6269924 NCBI chrNW_004624730:2,368,329...2,396,284
Ensembl chrNW_004624730:2,371,147...2,391,308 		JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO (PMID:27373832)
(MGI:5829526|PMID:27373832)		 UniProt PMID:27373832 MGI:5829526 NCBI chrNW_004624807:4,937,573...5,169,104
Ensembl chrNW_004624807:4,935,472...5,169,050 		JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISO (MGI:7275955|PMID:35420982) UniProt PMID:35420982 MGI:7275955 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221 		JBrowse link
G Ptpn13 protein tyrosine phosphatase non-receptor type 13 ISO RGD PMID:23769722 RGD:152975632 NCBI chrNW_004624872:3,183,381...3,406,339
Ensembl chrNW_004624872:3,226,000...3,405,805 		JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105 		JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624791:11,313,139...11,316,998
Ensembl chrNW_004624791:11,313,142...11,315,982 		JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha7 EPH receptor A7 involved_in ISO (MGI:5426777|PMID:19036963) BHF-UCL PMID:19036963 MGI:5426777 NCBI chrNW_004624799:560,441...753,509
Ensembl chrNW_004624799:560,432...754,132 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 ISO RGD PMID:23358245 RGD:9743980 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206 		JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chrNW_004624735:15,356,911...15,713,219
Ensembl chrNW_004624735:15,461,178...15,714,071 		JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:27893610 RGD:243048440 NCBI chrNW_004624730:3,316,122...3,361,820 JBrowse link
G Robo1 roundabout guidance receptor 1 ISO RGD PMID:27893610 RGD:243048440 NCBI chrNW_004624874:4,234,640...5,359,333
Ensembl chrNW_004624874:4,949,538...5,357,690 		JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO (MGI:5307186|PMID:22198949) ARUK-UCL PMID:22198949 MGI:5307186 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4820709|PMID:18986540) BHF-UCL PMID:18986540 MGI:4820709 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420 		JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:4457945 NCBI chrNW_004624739:27,132,533...28,430,765
Ensembl chrNW_004624739:27,134,993...28,430,686 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304 		JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624885:1,470,666...1,493,634
Ensembl chrNW_004624885:1,470,525...1,495,369 		JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in ISO (MGI:5800585|PMID:27683913) UniProt PMID:27683913 MGI:5800585 NCBI chrNW_004624735:38,455,821...38,502,864 JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:21670302) ParkinsonsUK-UCL PMID:21670302 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303 		JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISO (MGI:7275955|PMID:35420982) UniProt PMID:35420982 MGI:7275955 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221 		JBrowse link
G Sema4a semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624885:1,470,666...1,493,634
Ensembl chrNW_004624885:1,470,525...1,495,369 		JBrowse link
G Sema4d semaphorin 4D involved_in ISO (MGI:5498626|PMID:23699507)
(MGI:6269924|PMID:29981480)		 UniProt PMID:23699507 PMID:29981480 MGI:5498626 MGI:6269924 NCBI chrNW_004624765:23,097,771...23,244,778
Ensembl chrNW_004624765:23,197,462...23,229,922 		JBrowse link
positive regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 ISO RGD PMID:17626212 RGD:152995392 NCBI chrNW_004624786:10,297,795...10,304,363
Ensembl chrNW_004624786:10,297,807...10,304,473 		JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 ISO RGD PMID:18430734 RGD:2306201 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811 		JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624735:14,049,621...14,126,287
Ensembl chrNW_004624735:14,050,213...14,113,534 		JBrowse link
G Adgrb2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624764:14,964,614...15,001,429
Ensembl chrNW_004624764:14,964,480...15,001,320 		JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624753:26,284,931...26,980,937
Ensembl chrNW_004624753:26,287,621...26,980,325 		JBrowse link
G Adgre5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624901:1,550,122...1,563,447
Ensembl chrNW_004624901:1,550,137...1,562,968 		JBrowse link
G Adgrl1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624901:1,376,295...1,418,126
Ensembl chrNW_004624901:1,374,300...1,418,068 		JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624742:15,590,828...16,129,074
Ensembl chrNW_004624742:15,590,485...15,745,707 		JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624761:7,219,269...8,101,988
Ensembl chrNW_004624761:7,242,948...7,804,418 		JBrowse link
G Adnp activity dependent neuroprotector homeobox ISO RGD PMID:15800376 RGD:2312779 NCBI chrNW_004624790:4,822,467...4,854,852
Ensembl chrNW_004624790:4,832,494...4,854,845 		JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624772:5,231,266...5,236,703
Ensembl chrNW_004624772:5,231,266...5,236,496 		JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624816:5,184,423...5,189,691
Ensembl chrNW_004624816:5,184,536...5,187,659 		JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624730:3,641,716...3,644,504
Ensembl chrNW_004624730:3,642,603...3,644,135 		JBrowse link
G Asic2 acid sensing ion channel subunit 2 acts_upstream_of_or_within ISO (PMID:19571134) MGI PMID:19571134 NCBI chrNW_004624875:969,857...2,049,531
Ensembl chrNW_004624875:969,626...2,049,061 		JBrowse link
G Bdnf brain derived neurotrophic factor involved_in ISO (PMID:19036963) BHF-UCL PMID:19036963 NCBI chrNW_004624766:17,281,882...17,330,601
Ensembl chrNW_004624766:17,279,630...17,330,490 		JBrowse link
G Cbln1 cerebellin 1 precursor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21356198) Ensembl
MGI		 PMID:21356198 GO_REF:0000107 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105 		JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of_or_within ISO (PMID:21356198) MGI PMID:21356198 NCBI chrNW_004624806:8,371,966...8,381,908
Ensembl chrNW_004624806:8,371,995...8,380,059 		JBrowse link
G Clstn2 calsyntenin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) TreeGrafter
MGI		 PMID:24613359 GO_REF:0000118 NCBI chrNW_004624730:16,568,556...17,187,365
Ensembl chrNW_004624730:16,568,556...17,176,251 		JBrowse link
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) TreeGrafter
MGI		 PMID:24613359 GO_REF:0000118 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221 		JBrowse link
G Cux2 cut like homeobox 2 involved_in ISO (MGI:4836115|PMID:20510857) UniProt PMID:20510857 MGI:4836115 NCBI chrNW_004624747:20,784,323...21,021,090 JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 ISO RGD PMID:26738857 RGD:243048441 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100 		JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in ISO (MGI:5608921|PMID:25232112) UniProt PMID:25232112 MGI:5608921 NCBI chrNW_004624754:11,033,649...11,155,271
Ensembl chrNW_004624754:11,036,716...11,155,256 		JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase ISO RGD PMID:20427644 RGD:10401235 NCBI chrNW_004624782:7,606,576...7,668,771
Ensembl chrNW_004624782:7,606,655...7,666,206 		JBrowse link
G Efna5 ephrin A5 involved_in ISO (MGI:5426777|PMID:19036963) BHF-UCL PMID:19036963 MGI:5426777 NCBI chrNW_004624743:25,336,851...25,611,698
Ensembl chrNW_004624743:25,341,132...25,611,564 		JBrowse link
G Ephb1 EPH receptor B1 involved_in ISO (MGI:2683349|PMID:14691139) UniProt PMID:14691139 MGI:2683349 NCBI chrNW_004624730:11,120,018...11,564,972
Ensembl chrNW_004624730:11,119,909...11,565,293 		JBrowse link
G Ephb2 EPH receptor B2 involved_in ISO (MGI:2683349|PMID:14691139)
(MGI:4881358|PMID:21029865)		 RGD
UniProt		 PMID:14691139 PMID:21029865 PMID:21364901 MGI:2683349 MGI:4881358 RGD:127285794 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482 		JBrowse link
G Ephb3 EPH receptor B3 involved_in ISO (MGI:2683349|PMID:14691139) UniProt PMID:14691139 MGI:2683349 NCBI chrNW_004624730:71,964,337...71,983,021
Ensembl chrNW_004624730:71,965,108...71,982,593 		JBrowse link
G Flrt1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624767:22,167,309...22,248,680
Ensembl chrNW_004624767:22,169,616...22,189,578 		JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) Ensembl
MGI		 PMID:24613359 GO_REF:0000107 NCBI chrNW_004624734:16,587,367...16,674,998
Ensembl chrNW_004624734:16,587,357...16,676,063 		JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624741:15,343,304...15,355,742
Ensembl chrNW_004624741:15,343,653...15,355,727 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16491079) MGI
Ensembl		 PMID:16491079 GO_REF:0000107 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (PMID:27418511) UniProt PMID:27418511 NCBI chrNW_004624757:19,967,428...21,497,009
Ensembl chrNW_004624757:19,967,840...21,498,318 		JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISO (MGI:5645611|PMID:25908590) UniProt PMID:25908590 MGI:5645611 NCBI chrNW_004624730:66,491,230...66,625,642 JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein like 1 involved_in ISO (MGI:5645611|PMID:25908590) UniProt PMID:25908590 MGI:5645611 NCBI chrNW_004624787:266,027...1,489,032
Ensembl chrNW_004624787:268,829...1,291,144 		JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 ISO RGD PMID:26884337 RGD:11560558 NCBI chrNW_004624909:462,724...564,989
Ensembl chrNW_004624909:460,626...565,133 		JBrowse link
G Lingo2 leucine rich repeat and Ig domain containing 2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624736:32,177,085...33,454,296
Ensembl chrNW_004624736:32,186,995...32,203,250 		JBrowse link
G Lingo4 leucine rich repeat and Ig domain containing 4 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624772:19,470,853...19,474,959
Ensembl chrNW_004624772:19,472,576...19,476,708 		JBrowse link
G LOC101706826 beta-catenin-interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:2,621,962...2,751,653
Ensembl chrNW_004624818:2,621,993...2,665,257
Ensembl chrNW_004624818:2,621,993...2,665,257 		JBrowse link
G Lrrc24 leucine rich repeat containing 24 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624735:12,336,384...12,341,244
Ensembl chrNW_004624735:12,336,401...12,341,422 		JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in ISO (MGI:5294265|PMID:21940441) BHF-UCL PMID:21940441 MGI:5294265 NCBI chrNW_004624832:4,032,976...4,062,198
Ensembl chrNW_004624832:4,043,994...4,062,160 		JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624773:14,047,768...14,092,615
Ensembl chrNW_004624773:14,047,723...14,087,311 		JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) Ensembl
MGI		 PMID:24613359 GO_REF:0000107 NCBI chrNW_004624739:18,733,055...18,772,468
Ensembl chrNW_004624739:18,735,922...18,772,465 		JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624749:22,695,726...22,698,161
Ensembl chrNW_004624749:22,695,241...22,698,604 		JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) Ensembl
MGI		 PMID:24613359 GO_REF:0000107 NCBI chrNW_004624743:31,648,543...31,651,772
Ensembl chrNW_004624743:31,644,209...31,651,688 		JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624754:1,348,448...1,499,649
Ensembl chrNW_004624754:1,348,129...1,496,259 		JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624749:25,669,342...26,445,401
Ensembl chrNW_004624749:25,669,348...26,444,401 		JBrowse link
G Lrtm1 leucine rich repeats and transmembrane domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) TreeGrafter
MGI		 PMID:24613359 GO_REF:0000118 NCBI chrNW_004624822:2,343,968...2,354,038
Ensembl chrNW_004624822:2,343,967...2,354,525 		JBrowse link
G Lrtm2 leucine rich repeats and transmembrane domains 2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624735:11,056,080...11,073,939
Ensembl chrNW_004624735:11,055,971...11,066,338 		JBrowse link
G Nlgn1 neuroligin 1 involved_in
acts_upstream_of_or_within		 ISO PMID:17582332
(PMID:21356198)
PMID:15797875
(PMID:24613359)		 BHF-UCL
MGI		 PMID:15797875 PMID:17582332 PMID:21356198 PMID:24613359 RGD:8553502 RGD:8554205 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO PMID:15797875
(MGI:5320268|PMID:21642956)		 BHF-UCL
CACAO		 PMID:15797875 PMID:21642956 MGI:5320268 RGD:8554205 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172 		JBrowse link
G Nrxn1 neurexin 1 acts_upstream_of_or_within ISO (PMID:21356198) MGI PMID:21356198 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624885:1,989,027...2,005,474
Ensembl chrNW_004624885:1,989,138...2,005,577 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624809:8,274,736...8,622,287
Ensembl chrNW_004624809:8,276,951...8,616,765 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624768:15,239,111...15,619,979
Ensembl chrNW_004624768:15,252,354...15,619,601 		JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide ISO RGD PMID:16488155 RGD:2304173 NCBI chrNW_004624741:4,200,594...4,201,416
Ensembl chrNW_004624741:4,200,478...4,201,580 		JBrowse link
G Oxtr oxytocin receptor ISO RGD PMID:16488155 RGD:2304173 NCBI chrNW_004624731:3,367,645...3,384,815
Ensembl chrNW_004624731:3,370,701...3,385,640 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chrNW_004624815:1,290,106...1,376,961
Ensembl chrNW_004624815:1,289,997...1,369,610 		JBrowse link
G Prkca protein kinase C alpha ISO RGD PMID:18073185 RGD:2293299 NCBI chrNW_004624870:1,589,775...2,023,160
Ensembl chrNW_004624870:1,596,102...2,023,172 		JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D involved_in ISO (MGI:5645611|PMID:25908590), (MGI:5902672|PMID:25989451) UniProt PMID:25908590 PMID:25989451 MGI:5645611 MGI:5902672 NCBI chrNW_004624736:12,874,884...13,558,030
Ensembl chrNW_004624736:12,874,706...13,278,956 		JBrowse link
G Slit2 slit guidance ligand 2 ISO RGD PMID:26738857 RGD:243048441 NCBI chrNW_004624755:11,470,810...11,819,800
Ensembl chrNW_004624755:11,472,377...11,819,266 		JBrowse link
G Slitrk1 SLIT and NTRK like family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) Ensembl
MGI
TreeGrafter
UniProt		 PMID:24613359 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624751:16,635,950...16,638,771
Ensembl chrNW_004624751:16,636,183...16,638,273 		JBrowse link
G Slitrk2 SLIT and NTRK like family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) UniProt
MGI
TreeGrafter		 PMID:24613359 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624808:1,307,229...1,319,063
Ensembl chrNW_004624808:1,311,247...1,319,087 		JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) UniProt
MGI
TreeGrafter		 PMID:24613359 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531 		JBrowse link
G Slitrk4 SLIT and NTRK like family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) Ensembl
MGI
TreeGrafter
UniProt		 PMID:24613359 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624808:3,516,053...3,527,915
Ensembl chrNW_004624808:3,516,092...3,523,455 		JBrowse link
G Slitrk5 SLIT and NTRK like family member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) UniProt
MGI
TreeGrafter		 PMID:24613359 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624779:5,382,712...5,390,490
Ensembl chrNW_004624779:5,382,466...5,390,079 		JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) UniProt
MGI
TreeGrafter		 PMID:24613359 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624779:7,030,017...7,036,581
Ensembl chrNW_004624779:7,030,395...7,036,108 		JBrowse link
G Srpx2 sushi repeat containing protein X-linked 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624902:1,944,073...1,967,106
Ensembl chrNW_004624902:1,944,019...1,964,983 		JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ISO RGD PMID:16887122 RGD:27372880 NCBI chrNW_004624768:11,238,134...11,302,280
Ensembl chrNW_004624768:11,234,281...11,302,237 		JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:16418534 RGD:10043163 NCBI chrNW_004624744:17,434,733...17,726,348
Ensembl chrNW_004624744:17,434,686...17,727,127 		JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624939:560,192...698,100
Ensembl chrNW_004624939:560,106...661,570 		JBrowse link
G Thbs2 thrombospondin 2 ISO RGD PMID:15707899 RGD:1580068 NCBI chrNW_004624850:5,072,070...5,104,865
Ensembl chrNW_004624850:5,071,512...5,105,074 		JBrowse link
G Tpbg trophoblast glycoprotein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613359) Ensembl
MGI		 PMID:24613359 GO_REF:0000107 NCBI chrNW_004624799:12,226,350...12,325,178
Ensembl chrNW_004624799:12,226,350...12,230,701 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chrNW_004624735:7,431,955...7,464,698
Ensembl chrNW_004624735:7,432,078...7,464,672 		JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within		 ISO (PMID:18986540)
(PMID:9405095)		 BHF-UCL
MGI		 PMID:9405095 PMID:18986540 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303 		JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISO (MGI:1337916|PMID:10402191) UniProt PMID:10402191 MGI:1337916 NCBI chrNW_004624818:8,475,453...8,508,818
Ensembl chrNW_004624818:8,476,562...8,508,786 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420 		JBrowse link
G Musk muscle associated receptor tyrosine kinase ISO RGD PMID:14749715 RGD:2317108 NCBI chrNW_004624758:733,380...829,192
Ensembl chrNW_004624758:733,919...829,075 		JBrowse link
postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1ql2 complement C1q like 2 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624732:26,031,010...26,034,163
Ensembl chrNW_004624732:26,032,021...26,034,552 		JBrowse link
G C1ql3 complement C1q like 3 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624796:11,239,297...11,246,800
Ensembl chrNW_004624796:11,239,077...11,248,111 		JBrowse link
G Csmd2 CUB and Sushi multiple domains 2 involved_in ISO (PMID:31068362) SynGO PMID:31068362 NCBI chrNW_004624764:16,597,719...17,179,729
Ensembl chrNW_004624764:16,600,854...17,179,612 		JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in ISO PMID:29024665 SynGO PMID:29024665 RGD:13702141 NCBI chrNW_004624801:9,628,878...9,637,869
Ensembl chrNW_004624801:9,628,882...9,637,859 		JBrowse link
G Nrxn3 neurexin 3 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624734:22,161,837...23,757,367
Ensembl chrNW_004624734:22,163,166...23,692,660 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in ISO PMID:21262467 SynGO PMID:21262467 RGD:13702219 NCBI chrNW_004624768:15,239,111...15,619,979
Ensembl chrNW_004624768:15,252,354...15,619,601 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (MGI:4948759|PMID:21423165) BHF-UCL PMID:21423165 MGI:4948759 NCBI chrNW_004624752:72,545...127,321
Ensembl chrNW_004624752:72,615...127,325 		JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 acts_upstream_of_or_within ISO (PMID:29107521) MGI PMID:29107521 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531 		JBrowse link
postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephb2 EPH receptor B2 involved_in ISO PMID:11136979 SynGO PMID:11136979 RGD:13702452 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482 		JBrowse link
G LOC101696378 bile salt-activated lipase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:3,380,687...3,402,138
Ensembl chrNW_004624760:3,380,769...3,398,391 		JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (MGI:5295488|PMID:22038977) UniProt PMID:22038977 MGI:5295488 NCBI chrNW_004624767:1,708,866...1,757,629 JBrowse link
G Nlgn1 neuroligin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Nlgn3 neuroligin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304 		JBrowse link
postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein involved_in ISO (PMID:21041412) SynGO PMID:21041412 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (PMID:21041412) SynGO PMID:21041412 NCBI chrNW_004624945:734,532...767,184
Ensembl chrNW_004624945:734,532...767,168 		JBrowse link
G Dock7 dedicator of cytokinesis 7 involved_in ISO (PMID:21041412) SynGO PMID:21041412 NCBI chrNW_004624742:31,189,890...31,390,284
Ensembl chrNW_004624742:31,189,852...31,390,478 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:15620359) SynGO PMID:15620359 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (PMID:15620359), (PMID:19755106) SynGO PMID:15620359 PMID:19755106 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO PMID:17897391 SynGO PMID:17897391 RGD:9831151 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172 		JBrowse link
G Ntng2 netrin G2 involved_in ISO (PMID:16980967) SynGO PMID:16980967 NCBI chrNW_004624760:4,016,441...4,067,325
Ensembl chrNW_004624760:4,016,441...4,067,126 		JBrowse link
presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in ISO (PMID:12202822) SynGO PMID:12202822 NCBI chrNW_004624784:10,595,876...10,933,024
Ensembl chrNW_004624784:10,591,824...10,932,981 		JBrowse link
G Cntn5 contactin 5 involved_in ISO (PMID:24411736) SynGO PMID:24411736 NCBI chrNW_004624878:2,369,865...3,348,339
Ensembl chrNW_004624878:2,372,472...3,092,507 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:16818724) SynGO PMID:16818724 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725 		JBrowse link
G Efnb1 ephrin B1 involved_in ISO PMID:19915143 SynGO PMID:19915143 RGD:13702172 NCBI chrNW_004624891:1,394,948...1,407,898
Ensembl chrNW_004624891:1,394,852...1,407,959 		JBrowse link
G Efnb2 ephrin B2 involved_in ISO PMID:19915143 SynGO PMID:19915143 RGD:13702172 NCBI chrNW_004624793:5,089,675...5,130,022
Ensembl chrNW_004624793:5,089,639...5,130,503 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO PMID:20530549 SynGO PMID:20530549 RGD:13702329 NCBI chrNW_004624765:8,222,193...8,228,530
Ensembl chrNW_004624765:8,222,237...8,228,050 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (PMID:23358245) MGI PMID:23358245 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206 		JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within ISO (PMID:23358245) MGI PMID:23358245 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO PMID:12796785
(PMID:21410790)		 SynGO PMID:12796785 PMID:21410790 RGD:13702298 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D involved_in ISO (PMID:21926414) SynGO PMID:21926414 NCBI chrNW_004624736:12,874,884...13,558,030
Ensembl chrNW_004624736:12,874,706...13,278,956 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in ISO PMID:21262467 SynGO PMID:21262467 RGD:13702219 NCBI chrNW_004624828:4,688,555...4,764,805
Ensembl chrNW_004624828:4,716,249...4,764,614 		JBrowse link
G Sdcbp syndecan binding protein involved_in ISO PMID:19915143 SynGO PMID:19915143 RGD:13702172 NCBI chrNW_004624744:33,524,045...33,558,963
Ensembl chrNW_004624744:33,524,416...33,557,025 		JBrowse link
presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon presynaptic cytomatrix protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450 		JBrowse link
G Pcdh17 protocadherin 17 acts_upstream_of_or_within ISO (PMID:23684785) MGI PMID:23684785 NCBI chrNW_004624748:18,958,250...19,056,278
Ensembl chrNW_004624748:18,958,276...19,054,381 		JBrowse link
G Pclo piccolo presynaptic cytomatrix protein involved_in ISO PMID:22875941 UniProt PMID:22875941 RGD:14390063 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1rapl1 interleukin 1 receptor accessory protein like 1 involved_in ISO (MGI:5294265|PMID:21940441) CACAO PMID:21940441 MGI:5294265 NCBI chrNW_004624787:266,027...1,489,032
Ensembl chrNW_004624787:268,829...1,291,144 		JBrowse link
G LOC101696378 bile salt-activated lipase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:3,380,687...3,402,138
Ensembl chrNW_004624760:3,380,769...3,398,391 		JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (MGI:5295488|PMID:22038977) UniProt PMID:22038977 MGI:5295488 NCBI chrNW_004624767:1,708,866...1,757,629 JBrowse link
G Nlgn1 neuroligin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Nlgn3 neuroligin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172 		JBrowse link
G Nlgn4x neuroligin 4 X-linked involved_in ISO (PMID:19726642) BHF-UCL PMID:19726642 NCBI chrNW_004624834:3,646,449...4,000,328 JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D involved_in ISO (MGI:5294265|PMID:21940441) BHF-UCL PMID:21940441 MGI:5294265 NCBI chrNW_004624736:12,874,884...13,558,030
Ensembl chrNW_004624736:12,874,706...13,278,956 		JBrowse link
regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISO (MGI:6445033|PMID:32434929) UniProt PMID:32434929 MGI:6445033 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221 		JBrowse link
regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISO (MGI:6201911|PMID:29742426) UniProt PMID:29742426 MGI:6201911 NCBI chrNW_004624731:4,194,321...4,222,400
Ensembl chrNW_004624731:4,194,321...4,222,105 		JBrowse link
regulation of postsynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:29969655) SynGO PMID:29969655 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921 		JBrowse link
G Arhgap12 Rho GTPase activating protein 12 involved_in ISO PMID:26854232 SynGO PMID:26854232 RGD:11572714 NCBI chrNW_004624805:4,283,213...4,383,737
Ensembl chrNW_004624805:4,283,213...4,383,718 		JBrowse link
G Arhgap33 Rho GTPase activating protein 33 involved_in ISO (PMID:24003235) SynGO PMID:24003235 NCBI chrNW_004624794:10,075,329...10,089,356
Ensembl chrNW_004624794:10,075,462...10,088,958 		JBrowse link
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in ISO (PMID:28185854) SynGO PMID:28185854 NCBI chrNW_004624786:10,872,793...10,902,948
Ensembl chrNW_004624786:10,892,422...10,901,430 		JBrowse link
G Asic1 acid sensing ion channel subunit 1 involved_in ISO (PMID:17060608) SynGO PMID:17060608 NCBI chrNW_004624816:2,228,440...2,253,798
Ensembl chrNW_004624816:2,228,440...2,253,004 		JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in ISO (PMID:19571134) SynGO PMID:19571134 NCBI chrNW_004624875:969,857...2,049,531
Ensembl chrNW_004624875:969,626...2,049,061 		JBrowse link
G Carmil3 capping protein regulator and myosin 1 linker 3 involved_in ISO (PMID:30674877) SynGO PMID:30674877 NCBI chrNW_004624820:8,460,032...8,477,298
Ensembl chrNW_004624820:8,459,756...8,477,287 		JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A involved_in ISO (PMID:26826102) SynGO PMID:26826102 NCBI chrNW_004624901:1,188,687...1,204,627
Ensembl chrNW_004624901:1,188,986...1,205,511 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:22153079) SynGO PMID:22153079 NCBI chrNW_004624737:3,352,064...3,570,317
Ensembl chrNW_004624737:3,355,360...3,542,731 		JBrowse link
G Crmp1 collapsin response mediator protein 1 involved_in ISO (PMID:18003833) SynGO PMID:18003833 NCBI chrNW_004624755:22,484,725...22,541,032
Ensembl chrNW_004624755:22,484,731...22,540,976 		JBrowse link
G Cyfip2 cytoplasmic FMR1 interacting protein 2 involved_in ISO (PMID:28692454) SynGO PMID:28692454 NCBI chrNW_004624733:31,996,717...32,115,571
Ensembl chrNW_004624733:31,996,423...32,115,577 		JBrowse link
G Dclk1 doublecortin like kinase 1 involved_in ISO (PMID:23385585) SynGO PMID:23385585 NCBI chrNW_004624776:1,299,691...1,679,888
Ensembl chrNW_004624776:1,301,762...1,676,835 		JBrowse link
G Dcx doublecortin involved_in ISO (PMID:29788228) SynGO PMID:29788228 NCBI chrNW_004624803:4,168,556...4,304,642
Ensembl chrNW_004624803:4,168,556...4,299,979 		JBrowse link
G Dock1 dedicator of cytokinesis 1 involved_in ISO (PMID:21900250) SynGO PMID:21900250 NCBI chrNW_004624737:19,575,012...20,105,406
Ensembl chrNW_004624737:19,574,948...20,105,265 		JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO (PMID:25851601) SynGO PMID:25851601 NCBI chrNW_004624823:417,567...625,324
Ensembl chrNW_004624823:448,189...624,740 		JBrowse link
G Dock4 dedicator of cytokinesis 4 involved_in ISO PMID:23536706 SynGO PMID:23536706 RGD:405650262 NCBI chrNW_004624739:17,705,893...18,152,679
Ensembl chrNW_004624739:17,705,769...18,152,858 		JBrowse link
G Dpysl2 dihydropyrimidinase like 2 involved_in ISO PMID:29425794 SynGO PMID:29425794 RGD:405650303 NCBI chrNW_004624758:21,355,816...21,475,662
Ensembl chrNW_004624758:21,355,872...21,475,788 		JBrowse link
G Elmo1 engulfment and cell motility 1 involved_in ISO PMID:21900250 SynGO PMID:21900250 RGD:405650271 NCBI chrNW_004624740:23,776,788...24,354,682
Ensembl chrNW_004624740:23,881,197...24,353,526 		JBrowse link
G Fam107a family with sequence similarity 107 member A involved_in ISO (PMID:21969592) SynGO PMID:21969592 NCBI chrNW_004624822:5,577,686...5,593,608
Ensembl chrNW_004624822:5,579,690...5,582,321 		JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in ISO PMID:29983322 SynGO PMID:29983322 RGD:405650287 NCBI chrNW_004624734:16,587,367...16,674,998
Ensembl chrNW_004624734:16,587,357...16,676,063 		JBrowse link
G Gna13 G protein subunit alpha 13 involved_in ISO (PMID:34665640) SynGO PMID:34665640 NCBI chrNW_004624870:3,278,870...3,323,015
Ensembl chrNW_004624870:3,278,898...3,323,153 		JBrowse link
G Htr4 5-hydroxytryptamine receptor 4 involved_in ISO (PMID:32060357) SynGO PMID:32060357 NCBI chrNW_004624774:7,851,451...8,027,524
Ensembl chrNW_004624774:7,887,577...8,027,500 		JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 involved_in ISO PMID:23441206 SynGO PMID:23441206 RGD:11530033 NCBI chrNW_004624768:17,703,113...17,797,922
Ensembl chrNW_004624768:17,702,728...17,799,022 		JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (PMID:25407677) SynGO PMID:25407677 NCBI chrNW_004624767:1,708,866...1,757,629 JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in ISO (PMID:26490870) SynGO PMID:26490870 NCBI chrNW_004624758:15,956,300...16,006,174
Ensembl chrNW_004624758:15,956,236...16,006,192 		JBrowse link
G Lzts3 leucine zipper tumor suppressor family member 3 involved_in ISO PMID:27252646 SynGO PMID:27252646 RGD:13210540 NCBI chrNW_004624741:4,271,584...4,282,082
Ensembl chrNW_004624741:4,268,869...4,281,653 		JBrowse link
G Map1b microtubule associated protein 1B involved_in ISO (PMID:21984824) SynGO PMID:21984824 NCBI chrNW_004624905:1,198,157...1,304,128
Ensembl chrNW_004624905:1,198,205...1,304,309 		JBrowse link
G Mark1 microtubule affinity regulating kinase 1 involved_in ISO (PMID:27829159) SynGO PMID:27829159 NCBI chrNW_004624835:3,987,023...4,101,428
Ensembl chrNW_004624835:3,986,642...4,101,388 		JBrowse link
G Nae1 NEDD8 activating enzyme E1 subunit 1 involved_in ISO (PMID:25581363) SynGO PMID:25581363 NCBI chrNW_004624746:19,648,365...19,687,884
Ensembl chrNW_004624746:19,658,632...19,687,884 		JBrowse link
G Nckipsd NCK interacting protein with SH3 domain involved_in ISO PMID:23342115 SynGO PMID:23342115 RGD:405650384 NCBI chrNW_004624730:2,685,256...2,695,387
Ensembl chrNW_004624730:2,684,762...2,695,705 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 involved_in ISO (PMID:28872640) SynGO PMID:28872640 NCBI chrNW_004624731:37,425,966...37,567,938
Ensembl chrNW_004624731:37,433,809...37,568,677 		JBrowse link
G Nedd8 NEDD8 ubiquitin like modifier involved_in ISO (PMID:25581363) SynGO PMID:25581363 NCBI chrNW_004624820:8,319,763...8,329,748
Ensembl chrNW_004624820:8,319,832...8,329,748 		JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO (PMID:22153079) SynGO PMID:22153079 NCBI chrNW_004624831:2,717,184...2,778,907
Ensembl chrNW_004624831:2,717,226...2,778,977 		JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (PMID:36608123) SynGO PMID:36608123 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304 		JBrowse link
G Numb NUMB endocytic adaptor protein involved_in ISO PMID:16394100 SynGO PMID:16394100 RGD:2302413 NCBI chrNW_004624734:27,994,662...28,144,719 JBrowse link
G Numbl NUMB like endocytic adaptor protein involved_in ISO PMID:16394100 SynGO PMID:16394100 RGD:2302413 NCBI chrNW_004624925:595,679...623,479
Ensembl chrNW_004624925:596,448...622,641 		JBrowse link
G Palm paralemmin involved_in ISO PMID:18287537 SynGO PMID:18287537 RGD:8553517 NCBI chrNW_004624828:7,812,108...7,833,986
Ensembl chrNW_004624828:7,811,199...7,834,011 		JBrowse link
G Pcdh7 protocadherin 7 involved_in ISO PMID:32616769 SynGO PMID:32616769 RGD:405650241 NCBI chrNW_004624755:1,575,466...1,985,757
Ensembl chrNW_004624755:1,578,896...1,986,164 		JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in ISO PMID:19900557 SynGO PMID:19900557 RGD:8554803 NCBI chrNW_004624757:22,332,479...22,597,312
Ensembl chrNW_004624757:22,332,505...22,597,586 		JBrowse link
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B involved_in ISO (PMID:10922077) SynGO PMID:10922077 NCBI chrNW_004624795:6,124,273...6,137,776
Ensembl chrNW_004624795:6,124,159...6,137,955 		JBrowse link
G Psd pleckstrin and Sec7 domain containing involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chrNW_004624831:1,810,372...1,823,708
Ensembl chrNW_004624831:1,809,518...1,823,318 		JBrowse link
G Ptpn1 protein tyrosine phosphatase non-receptor type 1 involved_in ISO PMID:22844492 SynGO PMID:22844492 RGD:405650356 NCBI chrNW_004624790:5,070,537...5,135,243
Ensembl chrNW_004624790:5,073,476...5,135,181 		JBrowse link
G Pum2 pumilio RNA binding family member 2 involved_in ISO PMID:20133610 SynGO PMID:20133610 RGD:405650299 NCBI chrNW_004624738:2,951,253...3,042,905
Ensembl chrNW_004624738:2,950,415...3,043,011 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:31369617) SynGO PMID:31369617 NCBI chrNW_004624740:30,912,841...30,933,882
Ensembl chrNW_004624740:30,911,598...30,934,025 		JBrowse link
G Rac3 Rac family small GTPase 3 involved_in ISO (PMID:31369617) SynGO PMID:31369617 NCBI chrNW_004624801:10,862,490...10,864,856
Ensembl chrNW_004624801:10,862,502...10,864,879 		JBrowse link
G Rhog ras homolog family member G involved_in ISO (PMID:21900250) SynGO PMID:21900250 NCBI chrNW_004624817:5,269,691...5,281,160
Ensembl chrNW_004624817:5,269,691...5,281,101 		JBrowse link
G Rtn4 reticulon 4 involved_in ISO (PMID:26748478) SynGO PMID:26748478 NCBI chrNW_004624833:6,514,409...6,584,061 JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISO (PMID:26748478) SynGO PMID:26748478 NCBI chrNW_004624747:829,947...855,942
Ensembl chrNW_004624747:829,850...855,991 		JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 involved_in ISO (PMID:26748478) SynGO PMID:26748478 NCBI chrNW_004624828:2,371,750...2,419,330
Ensembl chrNW_004624828:2,390,742...2,394,106 		JBrowse link
G Samd4a sterile alpha motif domain containing 4A involved_in ISO PMID:22201125 SynGO PMID:22201125 RGD:405650281 NCBI chrNW_004624731:14,537,063...14,744,703
Ensembl chrNW_004624731:14,537,065...14,742,406 		JBrowse link
G Sema4c semaphorin 4C involved_in ISO (PMID:31444474) SynGO PMID:31444474 NCBI chrNW_004624749:2,737,251...2,747,540
Ensembl chrNW_004624749:2,737,251...2,745,979 		JBrowse link
G Senp1 SUMO specific peptidase 1 involved_in ISO PMID:29425794 SynGO PMID:29425794 RGD:405650303 NCBI chrNW_004624816:4,173,321...4,231,711
Ensembl chrNW_004624816:4,179,890...4,232,312 		JBrowse link
G Sigmar1 sigma non-opioid intracellular receptor 1 involved_in ISO PMID:20018732 SynGO PMID:20018732 RGD:405650297 NCBI chrNW_004624736:39,023,641...39,035,180
Ensembl chrNW_004624736:39,032,517...39,035,176 		JBrowse link
G Slc12a5 solute carrier family 12 member 5 involved_in ISO PMID:18093524 SynGO PMID:18093524 RGD:405650301 NCBI chrNW_004624790:8,539,103...8,576,877
Ensembl chrNW_004624790:8,537,185...8,576,861 		JBrowse link
G Srgap3 SLIT-ROBO Rho GTPase activating protein 3 involved_in ISO (PMID:21325512) SynGO PMID:21325512 NCBI chrNW_004624731:3,707,934...3,937,175
Ensembl chrNW_004624731:3,712,361...3,824,206 		JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in ISO PMID:20152115 SynGO PMID:20152115 RGD:8554654 NCBI chrNW_004624939:560,192...698,100
Ensembl chrNW_004624939:560,106...661,570 		JBrowse link
G Trim47 tripartite motif containing 47 involved_in ISO PMID:36211980 SynGO PMID:36211980 RGD:405650257 NCBI chrNW_004624801:5,761,584...5,765,866
Ensembl chrNW_004624801:5,761,584...5,765,873 		JBrowse link
G Ube2m ubiquitin conjugating enzyme E2 M involved_in ISO (PMID:25581363) SynGO PMID:25581363 NCBI chrNW_004624832:42,052...45,092
Ensembl chrNW_004624832:42,620...45,092 		JBrowse link
G Ube3b ubiquitin protein ligase E3B involved_in ISO (PMID:32249816) SynGO PMID:32249816 NCBI chrNW_004624747:10,886,965...10,951,808
Ensembl chrNW_004624747:10,887,991...10,952,217 		JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:31813652) SynGO PMID:31813652 NCBI chrNW_004624762:14,403,361...14,527,854
Ensembl chrNW_004624762:14,405,560...14,527,639 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:26521016) SynGO PMID:26521016 NCBI chrNW_004624914:160,483...188,534
Ensembl chrNW_004624914:160,483...188,490 		JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in ISO (PMID:18836441) SynGO PMID:18836441 NCBI chrNW_004624747:740,352...755,891
Ensembl chrNW_004624747:739,594...754,989 		JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in ISO PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chrNW_004624789:14,382,216...14,687,434
Ensembl chrNW_004624789:14,383,162...14,687,395 		JBrowse link
G Caskin1 CASK interacting protein 1 involved_in ISO (PMID:31727973) SynGO PMID:31727973 NCBI chrNW_004624913:62,217...79,228
Ensembl chrNW_004624913:62,332...77,819 		JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105 		JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in ISO PMID:10570482 SynGO PMID:10570482 RGD:8554363 NCBI chrNW_004624738:28,067,615...28,079,593
Ensembl chrNW_004624738:28,067,616...28,077,238 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in ISO (PMID:32324534) SynGO PMID:32324534 NCBI chrNW_004624780:5,161,245...5,212,641
Ensembl chrNW_004624780:5,161,073...5,213,870 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (PMID:20395510) SynGO PMID:20395510 NCBI chrNW_004624757:19,967,428...21,497,009
Ensembl chrNW_004624757:19,967,840...21,498,318 		JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISO (PMID:22357843) SynGO PMID:22357843 NCBI chrNW_004624730:66,491,230...66,625,642 JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in ISO PMID:29317530 SynGO PMID:29317530 RGD:405650325 NCBI chrNW_004624785:8,356,238...8,405,877
Ensembl chrNW_004624785:8,369,922...8,408,919 		JBrowse link
G Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 involved_in ISO PMID:16630835 SynGO PMID:16630835 RGD:13702351 NCBI chrNW_004624794:12,651,391...12,663,781
Ensembl chrNW_004624794:12,650,929...12,658,798 		JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:19,589,631...19,593,302
Ensembl chrNW_004624767:19,589,631...19,593,705 		JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in ISO PMID:19252495 SynGO PMID:19252495 RGD:13702321 NCBI chrNW_004624832:4,032,976...4,062,198
Ensembl chrNW_004624832:4,043,994...4,062,160 		JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in ISO PMID:19285470 SynGO PMID:19285470 RGD:8554788 NCBI chrNW_004624749:22,695,726...22,698,161
Ensembl chrNW_004624749:22,695,241...22,698,604 		JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in ISO PMID:19285470 SynGO PMID:19285470 RGD:8554788 NCBI chrNW_004624743:31,648,543...31,651,772
Ensembl chrNW_004624743:31,644,209...31,651,688 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:32324534) SynGO PMID:32324534 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:21410790) SynGO PMID:21410790 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO (PMID:34613779) SynGO PMID:34613779 NCBI chrNW_004624816:10,087,866...10,185,004
Ensembl chrNW_004624816:10,164,666...10,184,994 		JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in ISO (PMID:23711981), (PMID:34613779) SynGO PMID:23711981 PMID:34613779 NCBI chrNW_004624888:1,537,080...1,825,955
Ensembl chrNW_004624888:1,537,138...1,821,215 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:22,065,448...22,182,604
Ensembl chrNW_004624758:22,124,836...22,182,605 		JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D involved_in ISO PMID:29024665
(PMID:22357843)		 SynGO PMID:22357843 PMID:29024665 RGD:13702141 NCBI chrNW_004624736:12,874,884...13,558,030
Ensembl chrNW_004624736:12,874,706...13,278,956 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in ISO PMID:21262467
(PMID:21262467)		 SynGO PMID:21262467 RGD:13702219 NCBI chrNW_004624828:4,688,555...4,764,805
Ensembl chrNW_004624828:4,716,249...4,764,614 		JBrowse link
G Sipa1l1 signal induced proliferation associated 1 like 1 involved_in ISO PMID:11502259 SynGO PMID:11502259 RGD:8554032 NCBI chrNW_004624734:29,612,867...29,998,602
Ensembl chrNW_004624734:29,611,978...29,914,317 		JBrowse link
regulation of postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO PMID:20220006 SynGO PMID:20220006 RGD:8693579 NCBI chrNW_004624760:4,878,811...5,032,719
Ensembl chrNW_004624760:4,878,556...5,031,491 		JBrowse link
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 involved_in ISO (PMID:17690689) SynGO PMID:17690689 NCBI chrNW_004624898:3,058,094...3,301,738
Ensembl chrNW_004624898:3,057,830...3,302,221 		JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 involved_in ISO PMID:23839781 SynGO PMID:23839781 RGD:405650375 NCBI chrNW_004624819:732,118...735,391
Ensembl chrNW_004624819:732,268...735,313 		JBrowse link
G Eef1a2 eukaryotic translation elongation factor 1 alpha 2 involved_in ISO PMID:23839781 SynGO PMID:23839781 RGD:405650375 NCBI chrNW_004624741:29,154,762...29,163,794
Ensembl chrNW_004624741:29,154,993...29,163,799 		JBrowse link
G Gap43 growth associated protein 43 involved_in ISO PMID:25755278 SynGO PMID:25755278 RGD:13702431 NCBI chrNW_004624731:32,629,586...32,748,515
Ensembl chrNW_004624731:32,629,477...32,749,081 		JBrowse link
G Nptxr neuronal pentraxin receptor involved_in ISO (PMID:27986928) SynGO PMID:27986928 NCBI chrNW_004624752:9,315,834...9,335,205
Ensembl chrNW_004624752:9,315,853...9,336,043 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359) SynGO PMID:15620359 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 involved_in ISO (PMID:28576936) SynGO PMID:28576936 NCBI chrNW_004624767:19,694,471...19,734,653
Ensembl chrNW_004624767:19,694,241...19,734,650 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO PMID:19332546 SynGO PMID:19332546 RGD:155230776 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Arf6 ADP ribosylation factor 6 involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chrNW_004624731:18,880,065...18,883,456
Ensembl chrNW_004624731:18,882,690...18,883,217 		JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624757:7,264,425...7,267,979
Ensembl chrNW_004624757:7,264,434...7,268,105 		JBrowse link
G Clstn3 calsyntenin 3 involved_in ISO (PMID:24613359) SynGO PMID:24613359 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221 		JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO (PMID:25533483) ParkinsonsUK-UCL PMID:25533483 NCBI chrNW_004624730:72,251,840...72,271,724 JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in ISO PMID:23209303 SynGO PMID:23209303 RGD:8554251 NCBI chrNW_004624793:12,595,521...12,870,803
Ensembl chrNW_004624793:12,592,574...12,796,155 		JBrowse link
G Fzd1 frizzled class receptor 1 involved_in ISO (PMID:19883499) SynGO PMID:19883499 NCBI chrNW_004624809:2,021,118...2,025,826
Ensembl chrNW_004624809:2,021,124...2,025,589 		JBrowse link
G Gpc4 glypican 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624797:13,005,310...13,116,414
Ensembl chrNW_004624797:13,002,646...13,116,180 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO PMID:20395510
PMID:21410790		 SynGO PMID:20395510 PMID:21410790 RGD:13702257 RGD:13702347 NCBI chrNW_004624757:19,967,428...21,497,009
Ensembl chrNW_004624757:19,967,840...21,498,318 		JBrowse link
G Igsf11 immunoglobulin superfamily member 11 involved_in ISO (PMID:34261648) SynGO PMID:34261648 NCBI chrNW_004624731:29,109,803...29,272,322
Ensembl chrNW_004624731:29,109,879...29,276,256 		JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISO (PMID:22357843) SynGO PMID:22357843 NCBI chrNW_004624730:66,491,230...66,625,642 JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:21926414) SynGO PMID:21926414 NCBI chrNW_004624787:266,027...1,489,032
Ensembl chrNW_004624787:268,829...1,291,144 		JBrowse link
G Il1rapl2 interleukin 1 receptor accessory protein like 2 involved_in ISO (PMID:21926414) SynGO PMID:21926414 NCBI chrNW_004624803:10,917,671...12,315,002
Ensembl chrNW_004624803:10,919,651...12,243,480 		JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in ISO PMID:27480238 SynGO PMID:27480238 RGD:13702184 NCBI chrNW_004624794:10,221,669...10,234,029
Ensembl chrNW_004624794:10,221,736...10,229,232 		JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:19,589,631...19,593,302
Ensembl chrNW_004624767:19,589,631...19,593,705 		JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624813:10,930,009...11,196,036
Ensembl chrNW_004624813:11,049,888...11,196,095 		JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in ISO PMID:19252495 SynGO PMID:19252495 RGD:13702321 NCBI chrNW_004624832:4,032,976...4,062,198
Ensembl chrNW_004624832:4,043,994...4,062,160 		JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in ISO PMID:19285470 SynGO PMID:19285470 RGD:8554788 NCBI chrNW_004624749:22,695,726...22,698,161
Ensembl chrNW_004624749:22,695,241...22,698,604 		JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 involved_in ISO (PMID:26776509) SynGO PMID:26776509 NCBI chrNW_004624754:1,348,448...1,499,649
Ensembl chrNW_004624754:1,348,129...1,496,259 		JBrowse link
G Lrtm1 leucine rich repeats and transmembrane domains 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624822:2,343,968...2,354,038
Ensembl chrNW_004624822:2,343,967...2,354,525 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO (PMID:28641112) SynGO PMID:28641112 NCBI chrNW_004624754:20,434,625...20,485,402
Ensembl chrNW_004624754:20,434,648...20,481,206 		JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) SynGO PMID:27608760 NCBI chrNW_004624731:20,951,651...21,760,267
Ensembl chrNW_004624731:20,951,954...21,754,936 		JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO PMID:10892652 SynGO PMID:10892652 RGD:13702379 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:20393464) SynGO PMID:20393464 NCBI chrNW_004624780:11,297,306...11,525,236
Ensembl chrNW_004624780:11,301,182...12,424,066 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:17360903) SynGO PMID:17360903 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Ntng2 netrin G2 involved_in ISO (PMID:16980967) SynGO PMID:16980967 NCBI chrNW_004624760:4,016,441...4,067,325
Ensembl chrNW_004624760:4,016,441...4,067,126 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in ISO PMID:21262467 SynGO PMID:21262467 RGD:13702219 NCBI chrNW_004624768:15,239,111...15,619,979
Ensembl chrNW_004624768:15,252,354...15,619,601 		JBrowse link
G Slitrk1 SLIT and NTRK like family member 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624751:16,635,950...16,638,771
Ensembl chrNW_004624751:16,636,183...16,638,273 		JBrowse link
G Slitrk2 SLIT and NTRK like family member 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624808:1,307,229...1,319,063
Ensembl chrNW_004624808:1,311,247...1,319,087 		JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531 		JBrowse link
G Slitrk4 SLIT and NTRK like family member 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624808:3,516,053...3,527,915
Ensembl chrNW_004624808:3,516,092...3,523,455 		JBrowse link
G Slitrk5 SLIT and NTRK like family member 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624779:5,382,712...5,390,490
Ensembl chrNW_004624779:5,382,466...5,390,079 		JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624779:7,030,017...7,036,581
Ensembl chrNW_004624779:7,030,395...7,036,108 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:25533483) ParkinsonsUK-UCL PMID:25533483 NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320 		JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (PMID:19883499) SynGO PMID:19883499 NCBI chrNW_004624937:816,752...845,866
Ensembl chrNW_004624937:816,759...845,458 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:20530549) SynGO PMID:20530549 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303 		JBrowse link
regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO PMID:24991957 SynGO PMID:24991957 RGD:9587770 NCBI chrNW_004624860:3,285,086...3,318,939
Ensembl chrNW_004624860:3,283,837...3,318,985 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO (PMID:17301182) MGI PMID:17301182 NCBI chrNW_004624885:2,839,607...2,851,934
Ensembl chrNW_004624885:2,843,899...2,848,522 		JBrowse link
G Clstn3 calsyntenin 3 involved_in ISO (PMID:33101212) UniProt PMID:33101212 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221 		JBrowse link
G Crtac1 cartilage acidic protein 1 involved_in ISO (PMID:33658590) SynGO PMID:33658590 NCBI chrNW_004624737:9,498,107...9,653,496
Ensembl chrNW_004624737:9,497,385...9,653,295 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Elavl2 ELAV like RNA binding protein 2 involved_in ISO PMID:24991957 SynGO PMID:24991957 RGD:9587770 NCBI chrNW_004624736:27,554,445...27,884,382
Ensembl chrNW_004624736:27,692,201...27,882,787 		JBrowse link
G Ephb2 EPH receptor B2 involved_in ISO (PMID:17122040) SynGO PMID:17122040 NCBI chrNW_004624764:7,421,818...7,599,800
Ensembl chrNW_004624764:7,421,862...7,593,482 		JBrowse link
G Exoc7 exocyst complex component 7 involved_in ISO PMID:30374940 SynGO PMID:30374940 RGD:405650391 NCBI chrNW_004624801:5,988,774...6,008,779
Ensembl chrNW_004624801:5,986,256...6,008,856 		JBrowse link
G Ghsr growth hormone secretagogue receptor acts_upstream_of_or_within ISO (PMID:17060947) MGI PMID:17060947 NCBI chrNW_004624730:50,484,763...50,492,443
Ensembl chrNW_004624730:50,488,887...50,492,405 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:12657691) MGI PMID:12657691 NCBI chrNW_004624760:777,208...800,525
Ensembl chrNW_004624760:776,873...801,354 		JBrowse link
G Icam5 intercellular adhesion molecule 5 involved_in ISO (PMID:23015592) SynGO PMID:23015592 NCBI chrNW_004624828:2,454,771...2,461,732
Ensembl chrNW_004624828:2,454,753...2,461,732 		JBrowse link
G L1cam L1 cell adhesion molecule involved_in ISO (PMID:30846310) SynGO PMID:30846310 NCBI chrNW_004624946:512,413...533,669
Ensembl chrNW_004624946:513,297...525,009 		JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 involved_in ISO (PMID:23911103) SynGO PMID:23911103 NCBI chrNW_004624749:25,669,342...26,445,401
Ensembl chrNW_004624749:25,669,348...26,444,401 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3804504|PMID:18599438) Alzheimers_University_of_Toronto PMID:18599438 MGI:3804504 NCBI chrNW_004624743:8,072,871...8,235,174
Ensembl chrNW_004624743:8,072,673...8,235,252 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO RGD PMID:11827984 RGD:1599809 NCBI chrNW_004624784:14,997,533...15,058,971
Ensembl chrNW_004624784:14,997,424...15,059,761 		JBrowse link
G Negr1 neuronal growth regulator 1 ISO RGD PMID:18602091 RGD:40886282 NCBI chrNW_004624742:24,054,340...24,881,716
Ensembl chrNW_004624742:24,054,701...24,877,957 		JBrowse link
G Nlgn4x neuroligin 4 X-linked involved_in ISO (PMID:31257103) SynGO PMID:31257103 NCBI chrNW_004624834:3,646,449...4,000,328 JBrowse link
G Nrg2 neuregulin 2 involved_in ISO PMID:26674872 SynGO PMID:26674872 RGD:11070025 NCBI chrNW_004624743:32,620,025...32,810,990
Ensembl chrNW_004624743:32,620,295...32,810,391 		JBrowse link
G Ntn1 netrin 1 involved_in ISO (PMID:24174661) SynGO PMID:24174661 NCBI chrNW_004624786:11,508,643...11,707,060
Ensembl chrNW_004624786:11,526,050...11,703,258 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:28143929) SynGO PMID:28143929 NCBI chrNW_004624903:1,863,110...1,912,299
Ensembl chrNW_004624903:1,863,337...1,910,177 		JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in ISO PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chrNW_004624757:22,332,479...22,597,312
Ensembl chrNW_004624757:22,332,505...22,597,586 		JBrowse link
G Podxl podocalyxin like involved_in ISO (PMID:20706633) SynGO PMID:20706633 NCBI chrNW_004624783:4,840,072...4,888,709
Ensembl chrNW_004624783:4,840,164...4,888,705 		JBrowse link
G Ppp1r9a protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:15473970 RGD:10043779 NCBI chrNW_004624813:1,587,567...1,951,620
Ensembl chrNW_004624813:1,588,261...1,945,788 		JBrowse link
G Rap2a RAP2A, member of RAS oncogene family involved_in ISO (PMID:30063210) SynGO PMID:30063210 NCBI chrNW_004624879:3,972,582...4,015,335 JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISO (PMID:26838771) SynGO PMID:26838771 NCBI chrNW_004624747:829,947...855,942
Ensembl chrNW_004624747:829,850...855,991 		JBrowse link
G Sdc2 syndecan 2 involved_in ISO PMID:17548511 SynGO PMID:17548511 RGD:405650239 NCBI chrNW_004624763:3,809,850...3,920,364
Ensembl chrNW_004624763:3,809,569...3,919,346 		JBrowse link
G Sema4d semaphorin 4D involved_in ISO (PMID:24036351) SynGO PMID:24036351 NCBI chrNW_004624765:23,097,771...23,244,778
Ensembl chrNW_004624765:23,197,462...23,229,922 		JBrowse link
G Setd5 SET domain containing 5 involved_in ISO (MGI:6381850|PMID:31515109) UniProt PMID:31515109 MGI:6381850 NCBI chrNW_004624731:4,098,137...4,170,889
Ensembl chrNW_004624731:4,098,091...4,172,555 		JBrowse link
G Snap25 synaptosome associated protein 25 ISO RGD PMID:15478103 RGD:1581079 NCBI chrNW_004624741:11,218,259...11,303,406
Ensembl chrNW_004624741:11,274,490...11,302,813 		JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 involved_in ISO (PMID:28641114) SynGO PMID:28641114 NCBI chrNW_004624795:4,031,596...4,088,999
Ensembl chrNW_004624795:4,031,748...4,085,984 		JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO (PMID:22559944) SynGO PMID:22559944 NCBI chrNW_004624807:4,937,573...5,169,104
Ensembl chrNW_004624807:4,935,472...5,169,050 		JBrowse link
G Srpx2 sushi repeat containing protein X-linked 2 involved_in ISO PMID:24179158 SynGO PMID:24179158 RGD:8553698 NCBI chrNW_004624902:1,944,073...1,967,106
Ensembl chrNW_004624902:1,944,019...1,964,983 		JBrowse link
G Vldlr very low density lipoprotein receptor involved_in ISO (PMID:25644714) SynGO PMID:25644714 NCBI chrNW_004624736:7,280,478...7,316,897
Ensembl chrNW_004624736:7,280,490...7,316,946 		JBrowse link
regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Colq collagen like tail subunit of asymmetric acetylcholinesterase acts_upstream_of_or_within ISO (PMID:20053883) MGI PMID:20053883 NCBI chrNW_004624822:5,162,989...5,222,140
Ensembl chrNW_004624822:5,163,506...5,222,134 		JBrowse link
G Musk muscle associated receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:8653786) MGI PMID:8653786 NCBI chrNW_004624758:733,380...829,192
Ensembl chrNW_004624758:733,919...829,075 		JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21884692) Ensembl
MGI		 PMID:21884692 GO_REF:0000107 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671 		JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO (PMID:21884692) MGI PMID:21884692 NCBI chrNW_004624734:40,397,276...40,409,951
Ensembl chrNW_004624734:40,397,559...40,409,997 		JBrowse link
synapse assembly involved in innervation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19398581) TreeGrafter
MGI		 PMID:19398581 GO_REF:0000118 NCBI chrNW_004624730:61,667,177...61,684,162 JBrowse link
G Lrit3 leucine rich repeat, Ig-like and transmembrane domains 3 acts_upstream_of_or_within ISO (PMID:25997951) MGI PMID:25997951 NCBI chrNW_004624830:55,940...74,213
Ensembl chrNW_004624830:55,955...74,213 		JBrowse link
synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15689559) Ensembl
MGI		 PMID:15689559 GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Kcnj8 potassium inwardly rectifying channel subfamily J member 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26142302) Ensembl
MGI		 PMID:26142302 GO_REF:0000107 NCBI chrNW_004624752:16,939,289...16,945,692
Ensembl chrNW_004624752:16,939,384...16,946,723 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:19346129) MGI PMID:19346129 NCBI chrNW_004624750:1,190,712...1,524,051
Ensembl chrNW_004624750:1,286,336...1,527,159 		JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within		 ISO (MGI:3829843|PMID:18957220)
(PMID:17119023)		 UniProt
MGI		 PMID:17119023 PMID:18957220 MGI:3829843 NCBI chrNW_004624767:1,708,866...1,757,629 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15093
    multicellular organismal process 7111
      multicellular organism development 4711
        system development 4117
          nervous system development 2595
            synapse assembly 289
              excitatory synapse assembly + 43
              inhibitory synapse assembly + 21
              negative regulation of synapse assembly + 12
              positive regulation of synapse assembly + 80
              postsynapse assembly + 111
              presynapse assembly + 56
              regulation of synapse assembly + 206
              synapse assembly involved in innervation 2
              synaptic assembly at neuromuscular junction + 10
Path 2
Term Annotations click to browse term
  biological_process 15093
    cellular process 14252
      cellular component organization or biogenesis 6215
        cellular component organization 6013
          cellular component assembly 2844
            cell junction assembly 531
              synapse assembly 289
                excitatory synapse assembly + 43
                inhibitory synapse assembly + 21
                negative regulation of synapse assembly + 12
                positive regulation of synapse assembly + 80
                postsynapse assembly + 111
                presynapse assembly + 56
                regulation of synapse assembly + 206
                synapse assembly involved in innervation 2
                synaptic assembly at neuromuscular junction + 10
paths to the root